Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily protein | D560_3654 | P52062 | Negative | 3394735 - 3395901 | 42497.7 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | D560_3655 | Q7WI95 | Negative | 3395964 - 3396587 | 22009.4 |
| hypothetical protein | D560_3656 | Not Available | Positive | 3396631 - 3396771 | 4725.55 |
| hypothetical protein | D560_3657 | Not Available | Negative | 3397551 - 3397763 | 7430.05 |
| methyl-accepting chemotaxis (mcp) signaling domain protein | D560_3658 | P21822 | Negative | 3398487 - 3400142 | 57542.6 |
| transposase family protein | D560_3659 | Q06126 | Positive | 3400302 - 3401522 | 47461.6 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3660 | Q4G384 | Negative | 3401538 - 3402452 | 33462.5 |
| acyl-coa dehydrogenase, n-terminal domain protein | D560_3661 | Q5RBD5 | Positive | 3402579 - 3402947 | 13341.5 |
| acyl-coa dehydrogenase, c-terminal domain protein | D560_3662 | P45857 | Positive | 3402938 - 3403738 | 29761.8 |
| mmge/prpd family protein | D560_3663 | P54956 | Positive | 3403744 - 3405102 | 48086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




