Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | D560_3614 | P22008 | Negative | 3352937 - 3353770 | 28781.7 |
| bacterial extracellular solute-binding family protein | D560_3615 | Q5PJK8 | Positive | 3353962 - 3355272 | 47507.5 |
| hypothetical protein | D560_3616 | Not Available | Negative | 3355424 - 3355558 | 4877.0 |
| binding--dependent transport system inner membrane component family protein | D560_3617 | Q7CRU3 | Positive | 3355557 - 3356438 | 32290.1 |
| binding--dependent transport system inner membrane component family protein | D560_3618 | Q8YCB0 | Positive | 3356463 - 3357314 | 31210.2 |
| abc transporter family protein | D560_3619 | Q2L0H5 | Positive | 3357360 - 3358448 | 40075.4 |
| transposase family protein | D560_3620 | Q06126 | Positive | 3358552 - 3359772 | 47435.5 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | D560_3621 | P21175 | Negative | 3359827 - 3360951 | 39364.8 |
| serine hydrolase family protein | D560_3622 | Not Available | Positive | 3361145 - 3361753 | 21836.2 |
| udp-glucose/gdp-mannose dehydrogenase family, udp binding domain protein | D560_3623 | Q04972 | Negative | 3361756 - 3362244 | 18293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




