Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_3604 | Not Available | Positive | 3344599 - 3344718 | 4178.14 |
| transposase family protein | D560_3605 | Q06126 | Positive | 3344807 - 3346027 | 47382.5 |
| aspartate racemase family protein | D560_3606 | O58403 | Positive | 3346401 - 3347102 | 24895.2 |
| abc transporter family protein | D560_3607 | P21630 | Negative | 3347193 - 3347894 | 25501.1 |
| abc transporter family protein | D560_3608 | P21629 | Negative | 3347895 - 3348662 | 28257.6 |
| branched-chain amino acid transport system / permease component family protein | D560_3609 | P21628 | Negative | 3348659 - 3349897 | 44993.6 |
| branched-chain amino acid transport system / permease component family protein | D560_3610 | P0AEX8 | Negative | 3349897 - 3350823 | 32511.1 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | D560_3611 | P21175 | Negative | 3350927 - 3352042 | 39260.9 |
| hypothetical protein | D560_3612 | Not Available | Positive | 3352028 - 3352168 | 5152.48 |
| conserved hypothetical integral membrane family protein | D560_3613 | P37619 | Negative | 3352392 - 3352940 | 20190.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




