Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | D560_3594 | P23883 | Positive | 3335456 - 3336196 | 26842.9 |
| hypothetical protein | D560_3595 | Not Available | Positive | 3336269 - 3336787 | 18884.5 |
| phosphatidylserine decarboxylase | D560_3596 | Q2L0K8 | Positive | 3336861 - 3337751 | 32620.6 |
| fmn-dependent dehydrogenase family protein | D560_3597 | B9K115 | Positive | 3337884 - 3339062 | 42196.0 |
| nlpa lipofamily protein | D560_3598 | P28635 | Negative | 3339097 - 3339810 | 25720.7 |
| integrase core domain protein | D560_3599 | P24577 | Negative | 3340225 - 3341046 | 31216.8 |
| hypothetical protein | D560_3600 | P39619 | Positive | 3341256 - 3341666 | 14945.5 |
| eama-like transporter family protein | D560_3601 | Q68XV0 | Positive | 3341765 - 3342601 | 29849.4 |
| glucose / sorbosone dehydrogenase family protein | D560_3602 | P75804 | Negative | 3342606 - 3343745 | 40887.5 |
| glutathione s-transferase gst-4.5 | D560_3603 | P45875 | Positive | 3343853 - 3344467 | 22222.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




