Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspt/yide/ybjl antiporter duplication domain protein | D560_3584 | Q7WJ43 | Positive | 3324893 - 3326593 | 59640.8 |
| hypothetical protein | D560_3585 | P76243 | Positive | 3326673 - 3327050 | 14048.8 |
| iron dependent repressor, n-terminal dna binding domain protein | D560_3586 | P0ACL3 | Positive | 3327229 - 3327912 | 24562.1 |
| trap transporter solute receptor, dctp family protein | D560_3587 | P37676 | Positive | 3328045 - 3329031 | 35977.2 |
| tripartite atp-independent periplasmic transporter, dctq family | D560_3588 | Not Available | Positive | 3329034 - 3329507 | 17053.4 |
| trap transporter, dctm subunit | D560_3589 | Q312S1 | Positive | 3329512 - 3330795 | 44855.9 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_3590 | P27868 | Positive | 3330828 - 3333374 | 92599.2 |
| peptidase m20/m25/m40 family protein | D560_3591 | Q6DTN4 | Positive | 3333399 - 3333776 | 13304.1 |
| amidase, hydantoinase/carbamoylase family protein | D560_3592 | Q6DTN4 | Positive | 3333807 - 3334640 | 29643.3 |
| aldehyde dehydrogenase family protein | D560_3593 | P23883 | Positive | 3334702 - 3335403 | 24766.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




