Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | D560_3574 | P30855 | Positive | 3313145 - 3313768 | 22127.7 |
| eal domain protein | D560_3575 | Q04855 | Positive | 3313765 - 3314343 | 20681.0 |
| bacterial regulatory s, luxr family protein | D560_3576 | P0A4H3 | Positive | 3314780 - 3315403 | 22631.9 |
| virulence sensor protein bvgs | D560_3577 | P26762 | Positive | 3315469 - 3319065 | 131168.0 |
| site-specific recombinase family protein | D560_3578 | Not Available | Positive | 3319121 - 3319726 | 22758.1 |
| site-specific recombinase family protein | D560_3579 | Not Available | Positive | 3319759 - 3321183 | 52041.4 |
| major facilitator superfamily protein | D560_3580 | Q2FW71 | Positive | 3321254 - 3322951 | 61209.2 |
| hypothetical protein | D560_3581 | Not Available | Negative | 3323198 - 3323425 | 8320.06 |
| integrase core domain protein | D560_3582 | P24577 | Positive | 3323635 - 3324456 | 31158.7 |
| glutamate decarboxylase b, plp-dependent domain protein | D560_3583 | P54767 | Positive | 3324489 - 3324803 | 11530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




