Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase, nadp-dependent | D560_3554 | P16100 | Positive | 3292580 - 3294808 | 79713.4 |
| tripartite tricarboxylate transporter tctb family protein | D560_3555 | P70794 | Positive | 3295093 - 3295557 | 16285.0 |
| tripartite tricarboxylate transporter tcta family protein | D560_3556 | P70795 | Positive | 3295683 - 3297080 | 49121.8 |
| abc transporter family protein | D560_3557 | P37774 | Negative | 3297129 - 3297881 | 27714.1 |
| amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain protein | D560_3558 | P54536 | Negative | 3297889 - 3298512 | 23362.5 |
| bacterial extracellular solute-binding s, 3 family protein | D560_3559 | P0AEN0 | Negative | 3298579 - 3299367 | 28565.2 |
| ycei-like domain protein | D560_3560 | A5F0B6 | Negative | 3299485 - 3300066 | 21229.3 |
| putative lipoprotein | D560_3561 | Not Available | Negative | 3300159 - 3300332 | 5296.63 |
| hypothetical protein | D560_3562 | Not Available | Negative | 3300349 - 3300732 | 13582.3 |
| hypothetical protein | D560_3563 | Not Available | Positive | 3301317 - 3301646 | 11797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




