Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | D560_3504 | Q9ZCD3 | Positive | 3245703 - 3246524 | 29651.8 |
| protein-p-ii uridylyltransferase | D560_3505 | Q2L165 | Positive | 3246551 - 3249148 | 98654.9 |
| marc integral membrane family protein | D560_3506 | Q5PN94 | Positive | 3249304 - 3249909 | 21108.3 |
| disulfide bond formation dsbb family protein | D560_3507 | Not Available | Positive | 3250122 - 3250403 | 9826.12 |
| amidophosphoribosyltransferase | D560_3508 | Q51342 | Negative | 3250495 - 3252015 | 55731.5 |
| colicin v production family protein | D560_3509 | P45108 | Negative | 3252059 - 3252523 | 16519.7 |
| sporulation related domain protein | D560_3510 | Not Available | Negative | 3252544 - 3253362 | 28311.7 |
| bifunctional folc family protein | D560_3511 | P08192 | Negative | 3253540 - 3254784 | 44575.7 |
| cupin domain protein | D560_3512 | Q59013 | Positive | 3254947 - 3255333 | 14168.9 |
| tripartite tricarboxylate transporter receptor family protein | D560_3513 | P0A177 | Positive | 3255362 - 3256321 | 33681.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




