Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m50 family protein | D560_3494 | Q8XZI4 | Negative | 3237401 - 3237925 | 18408.7 |
| rip metalloprotease rsep | D560_3495 | Q8XZI4 | Negative | 3237919 - 3238647 | 25606.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | D560_3496 | Q2L155 | Negative | 3238745 - 3239944 | 41921.5 |
| cytidylyltransferase family protein | D560_3497 | Q59640 | Negative | 3239941 - 3240792 | 29766.3 |
| di-trans,poly-cis-decaprenylcistransferase | D560_3498 | Q7WJ90 | Negative | 3240823 - 3241581 | 28524.8 |
| ribosome recycling factor | D560_3499 | Q2L159 | Negative | 3241753 - 3242313 | 20780.9 |
| ump kinase | D560_3500 | Q7WJ92 | Negative | 3242327 - 3243043 | 25522.0 |
| translation elongation factor ts | D560_3501 | Q2L161 | Negative | 3243149 - 3244027 | 30909.2 |
| ribosomal protein s2 | D560_3502 | Q2L162 | Negative | 3244176 - 3244925 | 27558.3 |
| hypothetical protein | D560_3503 | Not Available | Positive | 3245528 - 3245653 | 4426.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




