Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_3484 | Not Available | Negative | 3228711 - 3229109 | 14696.7 |
| spou rrna methylase family protein | D560_3485 | P74261 | Negative | 3229171 - 3229950 | 27877.5 |
| ribonuclease hii family protein | D560_3486 | Q2L146 | Negative | 3229947 - 3230507 | 19748.1 |
| lipid-a-disaccharide synthase | D560_3487 | Q2L147 | Negative | 3230542 - 3231711 | 42751.2 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | D560_3488 | Q39F55 | Negative | 3231726 - 3232520 | 28235.6 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | D560_3489 | Q2L150 | Negative | 3232521 - 3232976 | 16766.6 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | D560_3490 | Q2L151 | Negative | 3233059 - 3234144 | 37499.9 |
| outer membrane family protein | D560_3491 | Q9S340 | Negative | 3234151 - 3234699 | 20462.2 |
| outer membrane assembly complex, yaet protein | D560_3492 | Q9K1H0 | Negative | 3234884 - 3237223 | 86759.2 |
| hypothetical protein | D560_3493 | Not Available | Positive | 3237203 - 3237322 | 4353.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




