Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix family protein | D560_3474 | P37007 | Positive | 3218767 - 3219717 | 35640.7 |
| helix-turn-helix family protein | D560_3475 | Not Available | Positive | 3219816 - 3220442 | 22055.3 |
| integrase core domain protein | D560_3476 | P25438 | Positive | 3220415 - 3220765 | 13674.2 |
| diguanylate cyclase domain protein | D560_3477 | A0A0H2ZJS2 | Positive | 3220777 - 3221916 | 41053.3 |
| helix-turn-helix family protein | D560_3478 | P37007 | Negative | 3221913 - 3222863 | 35686.8 |
| spfh domain / band 7 family protein | D560_3479 | O60121 | Negative | 3223008 - 3223910 | 32612.4 |
| hypothetical protein | D560_3480 | Not Available | Negative | 3223965 - 3224396 | 15163.7 |
| glutamine amidotransferase class-i family protein | D560_3481 | Q2RGP2 | Positive | 3224531 - 3225268 | 26008.9 |
| phosphoenolpyruvate synthase | D560_3482 | Q02KR1 | Negative | 3225348 - 3227633 | 83442.5 |
| kinase/pyrophosphorylase family protein | D560_3483 | Q2L142 | Positive | 3227873 - 3228700 | 30835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




