Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial transcriptional regulator family protein | D560_3454 | Q0K846 | Negative | 3203551 - 3204021 | 16369.0 |
| iclr helix-turn-helix domain protein | D560_3455 | Not Available | Negative | 3204042 - 3204284 | 9007.95 |
| ankyrin repeat family protein | D560_3456 | Q68DC2 | Negative | 3204476 - 3205291 | 28717.4 |
| hydrolase, tatd family protein | D560_3457 | P44718 | Negative | 3205327 - 3206073 | 27857.4 |
| dna polymerase iii, delta' subunit | D560_3458 | P52024 | Negative | 3206118 - 3207173 | 37035.1 |
| thymidylate kinase | D560_3459 | Q7WJ63 | Negative | 3207170 - 3207793 | 23208.6 |
| yceg-like family protein | D560_3460 | P44720 | Negative | 3207793 - 3208809 | 37890.6 |
| glycine cleavage t-c-terminal barrel domain protein | D560_3461 | A7FF28 | Positive | 3209008 - 3209913 | 31400.6 |
| taurine catabolism dioxygenase taud, tfda family protein | D560_3462 | Q88RA3 | Negative | 3209936 - 3210802 | 31757.6 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3463 | P42722 | Positive | 3210913 - 3211671 | 27910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




