Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein oprm | D560_3424 | Q51487 | Positive | 3176540 - 3177973 | 51695.3 |
| efflux transporter, rnd family, mfp subunit | D560_3425 | P37626 | Positive | 3177987 - 3179048 | 37446.6 |
| heme abc exporter, atp-binding protein ccma | D560_3426 | P37624 | Positive | 3179048 - 3181777 | 99312.3 |
| inner membrane transport permease yhhj | D560_3427 | P0AGH1 | Positive | 3181781 - 3182908 | 41069.1 |
| hypothetical protein | D560_3428 | Not Available | Positive | 3182948 - 3183418 | 16442.2 |
| acetoacetyl-coa reductase | D560_3429 | P14697 | Positive | 3183408 - 3184151 | 26057.4 |
| universal stress family protein | D560_3430 | Q57951 | Positive | 3184258 - 3184686 | 14913.2 |
| doxx family protein | D560_3431 | P54720 | Positive | 3184892 - 3185299 | 14005.7 |
| yxwgxw repeat family protein | D560_3432 | Not Available | Positive | 3185614 - 3186600 | 35552.3 |
| ahpc/tsa family protein | D560_3433 | Q8P9V9 | Positive | 3187053 - 3187607 | 19501.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




