Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3364 | O33945 | Positive | 3123708 - 3124655 | 35020.3 |
| pin domain protein | D560_3365 | Not Available | Positive | 3125039 - 3125575 | 20732.7 |
| act domain protein | D560_3366 | Q74FW6 | Negative | 3125569 - 3126033 | 16605.2 |
| helix-turn-helix family protein | D560_3367 | P37007 | Positive | 3126153 - 3127103 | 35686.8 |
| pyridoxal-phosphate dependent enzyme family protein | D560_3368 | Q2FH01 | Negative | 3127083 - 3127835 | 26805.5 |
| hypothetical protein | D560_3369 | Not Available | Negative | 3127848 - 3128579 | 27146.5 |
| polyribonucleotide nucleotidyltransferase | D560_3370 | Q2KWI6 | Negative | 3128736 - 3130346 | 57722.3 |
| 3' exoribonuclease, domain 1 family protein | D560_3371 | Q2KWI6 | Negative | 3130340 - 3130900 | 20470.7 |
| ribosomal protein s15 | D560_3372 | Q7WCP9 | Negative | 3130990 - 3131259 | 10208.4 |
| putative lipoprotein | D560_3373 | Not Available | Positive | 3131553 - 3132071 | 19352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




