Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | D560_3344 | Q1RIN4 | Positive | 3103546 - 3104166 | 22679.2 |
| transglycosylase associated family protein | D560_3345 | P58767 | Positive | 3104266 - 3104517 | 8542.06 |
| outer membrane protein oprm | D560_3346 | Q9KJC1 | Negative | 3104605 - 3106083 | 52746.5 |
| multidrug resistance protein mexb | D560_3347 | P52002 | Negative | 3106080 - 3109250 | 113480.0 |
| acriflavine resistance protein a | D560_3348 | P0AE07 | Negative | 3109263 - 3110414 | 40182.1 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3349 | A0A0H2ZDG9 | Positive | 3110669 - 3111580 | 33997.9 |
| pseudouridine synthase family protein | D560_3350 | P32684 | Negative | 3111648 - 3112379 | 27307.1 |
| chorismate lyase family protein | D560_3351 | Q2L1H6 | Positive | 3112445 - 3113080 | 23682.9 |
| hypothetical protein | D560_3352 | A9MJ53 | Negative | 3113066 - 3114244 | 40205.4 |
| yaeq family protein | D560_3353 | P0A1S7 | Negative | 3114405 - 3114953 | 20351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




