Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyllysine-residue acetyltransferase | D560_3334 | Q59098 | Negative | 3091281 - 3092567 | 45096.4 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D560_3335 | Q59097 | Negative | 3092957 - 3095668 | 100646.0 |
| hypothetical protein | D560_3336 | Not Available | Positive | 3095672 - 3095794 | 4550.39 |
| sensory box protein | D560_3337 | P37739 | Positive | 3096214 - 3097968 | 65881.6 |
| response regulator | D560_3338 | P23221 | Positive | 3098031 - 3098591 | 20642.1 |
| tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein | D560_3339 | Q2L1G0 | Positive | 3098588 - 3099442 | 29463.2 |
| peptidase m3 family protein | D560_3340 | P27237 | Positive | 3099562 - 3101616 | 75919.7 |
| helix-turn-helix family protein | D560_3341 | P37007 | Positive | 3101726 - 3102676 | 35659.8 |
| methyltransferase domain protein | D560_3342 | Not Available | Negative | 3102673 - 3103155 | 18846.0 |
| hypothetical protein | D560_3343 | Not Available | Negative | 3103222 - 3103356 | 4714.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




