Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | D560_3304 | Not Available | Positive | 3064754 - 3064930 | 5887.97 |
| phospholipase c, phosphocholine-specific | D560_3305 | P15713 | Positive | 3064960 - 3067131 | 79558.1 |
| h+ antiporter-2 family protein | D560_3306 | A8GHR1 | Negative | 3067184 - 3068503 | 46199.5 |
| transposase family protein | D560_3307 | Q06126 | Positive | 3068592 - 3069812 | 47435.5 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3308 | P16931 | Positive | 3070031 - 3070708 | 24217.3 |
| transcriptional regulator, lysr family | D560_3309 | Not Available | Positive | 3070705 - 3070890 | 6602.04 |
| major facilitator superfamily protein | D560_3310 | O31444 | Negative | 3070887 - 3072059 | 40915.3 |
| carbon-nitrogen hydrolase family protein | D560_3311 | P58054 | Negative | 3072944 - 3073654 | 25672.3 |
| slyx family protein | D560_3312 | Q7P0W0 | Negative | 3073752 - 3073970 | 8309.83 |
| hypothetical protein | D560_3313 | O32132 | Positive | 3074045 - 3074314 | 9336.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




