Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation topological specificity factor mine family protein | D560_0322 | Q2KVW5 | Positive | 294702 - 294848 | 5472.58 |
| transposase family protein | D560_0323 | Q06126 | Positive | 294970 - 296190 | 47479.6 |
| glycine zipper 2tm domain protein | D560_0324 | P37723 | Negative | 296242 - 296463 | 6845.41 |
| isochorismatase family protein | D560_0325 | Q08C33 | Negative | 296659 - 297192 | 19495.9 |
| heme abc exporter, atp-binding protein ccma | D560_0326 | P0A9W4 | Negative | 297243 - 298916 | 61879.6 |
| eama-like transporter family protein | D560_0327 | O31448 | Negative | 299016 - 300014 | 35633.2 |
| hypothetical protein | D560_0328 | Not Available | Positive | 300047 - 300556 | 18480.0 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_0329 | P42065 | Negative | 300574 - 301554 | 35905.5 |
| oligopeptide/dipeptide abc transporter, atp-binding, c-terminal domain protein | D560_0330 | P26905 | Negative | 301566 - 302540 | 34795.6 |
| binding--dependent transport system inner membrane component family protein | D560_0331 | A0A0H2ZFV0 | Negative | 302548 - 303423 | 30757.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




