Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | D560_3284 | P63390 | Negative | 3046761 - 3048668 | 70291.7 |
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | D560_3285 | Q7VXJ6 | Negative | 3048683 - 3049549 | 32383.6 |
| succinyl-diaminopimelate desuccinylase | D560_3286 | Q2L2J6 | Negative | 3049580 - 3050713 | 40351.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D560_3287 | Q2L2J5 | Negative | 3050713 - 3051534 | 29000.7 |
| succinyldiaminopimelate transaminase | D560_3288 | Q3Z8H5 | Negative | 3051559 - 3052749 | 43266.6 |
| Trna-leu | Not Available | Not Available | Positive | 3052795 - 3052881 | Not Available |
| putative integrase/recombinase domain protein | D560_3290 | P46495 | Positive | 3053051 - 3053332 | 10310.4 |
| transposase family protein | D560_3291 | P17985 | Positive | 3053858 - 3054124 | 10233.6 |
| integrase core domain protein | D560_3292 | P24577 | Positive | 3054145 - 3054945 | 31627.9 |
| hypothetical protein | D560_3293 | Not Available | Negative | 3055339 - 3055569 | 8555.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




