Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | D560_3274 | Q2L2K5 | Negative | 3032534 - 3035395 | 105687.0 |
| riboflavin biosynthesis protein ribf | D560_3275 | P0AG42 | Negative | 3035385 - 3036341 | 34889.0 |
| formyl transferase family protein | D560_3276 | P43846 | Positive | 3036399 - 3036569 | 5875.97 |
| phosphoribosylglycinamide formyltransferase | D560_3277 | P08179 | Positive | 3036633 - 3037067 | 15672.0 |
| nol1/nop2/sun family protein | D560_3278 | P72943 | Positive | 3037254 - 3038840 | 57963.2 |
| hypothetical protein | D560_3279 | Not Available | Negative | 3039132 - 3039287 | 5586.83 |
| integrase core domain protein | D560_3280 | P24577 | Positive | 3039497 - 3040318 | 31216.8 |
| fatty acid desaturase family protein | D560_3281 | Q9LND9 | Positive | 3040619 - 3041827 | 45858.3 |
| uvrd/rep helicase n-terminal domain protein | D560_3282 | P03018 | Positive | 3041937 - 3044105 | 79575.7 |
| tonb-dependent receptor plug domain protein | D560_3283 | P31827 | Negative | 3044116 - 3046497 | 90351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




