Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin, osmc subfamily protein | D560_3254 | P0C0L2 | Negative | 3018836 - 3019258 | 14413.1 |
| shikimate / quinate 5-dehydrogenase family protein | D560_3255 | Q9HDZ0 | Positive | 3019378 - 3020355 | 34730.7 |
| receptor ligand binding region family protein | D560_3256 | Q8G3D4 | Positive | 3020615 - 3021586 | 34245.9 |
| ectoine/hydroxyectoine abc transporter solute-binding protein ehub | D560_3257 | P55659 | Positive | 3021755 - 3022642 | 31150.8 |
| ectoine/hydroxyectoine abc transporter, permease protein ehuc | D560_3258 | P55660 | Positive | 3022701 - 3023294 | 21659.6 |
| ectoine/hydroxyectoine abc transporter, permease protein ehud | D560_3259 | P55661 | Positive | 3023291 - 3023962 | 24318.6 |
| abc transporter family protein | D560_3260 | P55662 | Positive | 3023962 - 3024732 | 28525.5 |
| dutp diphosphatase family protein | D560_3261 | Q2L2L5 | Negative | 3024783 - 3025196 | 14272.3 |
| putative membrane protein | D560_3262 | Not Available | Negative | 3025274 - 3025732 | 16311.7 |
| hypothetical protein | D560_3263 | Q55705 | Negative | 3025753 - 3026217 | 16766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




