Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase domain protein | D560_3214 | P58402 | Negative | 2985374 - 2988088 | 98998.0 |
| eal domain protein | D560_3215 | Q9I310 | Positive | 2988340 - 2989704 | 50840.4 |
| chorismate synthase | D560_3216 | Q2KYK7 | Positive | 2989744 - 2990802 | 37470.3 |
| peptidase m48 family protein | D560_3217 | Q3SZN3 | Positive | 2990830 - 2991648 | 29275.0 |
| bacterial regulatory s, luxr family protein | D560_3218 | P9WGM4 | Negative | 2991686 - 2991988 | 10617.8 |
| integrase core domain protein | D560_3219 | P24577 | Negative | 2992048 - 2992209 | 6030.23 |
| integrase core domain protein | D560_3220 | P24577 | Negative | 2992308 - 2992871 | 21202.9 |
| bacterial regulatory, luxr family protein 6 | D560_3221 | Not Available | Negative | 2993228 - 2993383 | 5614.56 |
| 3-isopropylmalate dehydratase, large subunit | D560_3222 | Q7WKH6 | Positive | 2994097 - 2995500 | 50699.7 |
| 3-isopropylmalate dehydratase, small subunit | D560_3223 | Q2KYL4 | Positive | 2995513 - 2996163 | 24649.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




