Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type iv pilin | D560_3194 | Not Available | Positive | 2967014 - 2967274 | 8972.85 |
| helix-turn-helix family protein | D560_3195 | P37007 | Positive | 2967496 - 2968446 | 35659.8 |
| putative pilus assembly protein | D560_3196 | Not Available | Positive | 2968496 - 2969704 | 45800.4 |
| putative pilus assembly protein | D560_3197 | Not Available | Positive | 2969704 - 2970465 | 28041.6 |
| flp pilus assembly protein cpab | D560_3198 | Not Available | Positive | 2971222 - 2971914 | 24629.6 |
| flp pilus assembly atpase cpaf domain protein | D560_3199 | Not Available | Positive | 2973448 - 2973894 | 15425.6 |
| hypothetical protein | D560_3200 | Not Available | Negative | 2973872 - 2974027 | 5645.91 |
| integrase core domain protein | D560_3201 | P24577 | Positive | 2974237 - 2975058 | 31158.7 |
| type ii/iv secretion system family protein | D560_3202 | P9WMT2 | Positive | 2975150 - 2975713 | 20634.9 |
| type ii secretion system (t2ss), f family protein | D560_3203 | Not Available | Positive | 2975710 - 2976531 | 29846.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




