Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase ruvb | D560_0312 | Q2KVY2 | Positive | 281775 - 282791 | 37219.8 |
| atp-dependent dna helicase recq | D560_0313 | P15043 | Negative | 282788 - 284608 | 67520.9 |
| type vii secretion system (t7ss), usher family protein | D560_0314 | Not Available | Negative | 284724 - 285932 | 42225.2 |
| response regulator | D560_0315 | P0AA18 | Positive | 286164 - 286865 | 26134.4 |
| hamp domain protein | D560_0316 | A0A0H3NIL4 | Positive | 286878 - 288356 | 54350.4 |
| cytochrome oxidase subunit ii family protein | D560_0317 | P0ABK4 | Negative | 288372 - 289424 | 37869.6 |
| bacterial cytochrome ubiquinol oxidase family protein | D560_0318 | P94364 | Negative | 289421 - 290758 | 47953.8 |
| glutamine--trna ligase | D560_0319 | Q2KVX0 | Positive | 290877 - 292637 | 66530.2 |
| septum site-determining protein minc | D560_0320 | Q2KVW8 | Positive | 292822 - 293664 | 29375.1 |
| septum site-determining protein mind | D560_0321 | P0AEZ5 | Positive | 293773 - 294573 | 29133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




