Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase l chain, atp binding domain protein | D560_3113 | Q8XZ83 | Positive | 2895842 - 2896984 | 41442.9 |
| carbamoyl-phosphate synthase l chain, atp binding domain protein | D560_3114 | Q8XZ83 | Positive | 2896936 - 2899080 | 78769.3 |
| aspartyl/asparaginyl beta-hydroxylase family protein | D560_3115 | Q12797 | Positive | 2899145 - 2900041 | 34546.7 |
| short chain dehydrogenase family protein | D560_3116 | Q6IAN0 | Positive | 2900109 - 2900630 | 18028.7 |
| abc superfamily atp binding cassette transporter domain protein | D560_3117 | P25970 | Positive | 2900624 - 2900869 | 9372.72 |
| histidine phosphatase super family protein | D560_3118 | F4KI56 | Negative | 2900875 - 2901513 | 23574.7 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3119 | P37499 | Negative | 2901506 - 2902414 | 32420.6 |
| tobe domain protein | D560_3120 | Q9I6T2 | Negative | 2902426 - 2902914 | 17570.0 |
| abc transporter family protein | D560_3121 | A0LUE6 | Negative | 2902911 - 2903327 | 15829.6 |
| hypothetical protein | D560_3122 | Not Available | Positive | 2903334 - 2903549 | 7488.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




