Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein, ybab/ebfc family | D560_3103 | Q2KVU6 | Positive | 2888403 - 2888729 | 11513.2 |
| recombination protein recr | D560_3104 | Q2KVU4 | Positive | 2888744 - 2889250 | 18327.9 |
| acyl-coa transferases/carnitine dehydratase domain protein | D560_3105 | A9WGE3 | Positive | 2889449 - 2889679 | 8329.03 |
| coa-transferase iii family protein | D560_3106 | A9WGE3 | Positive | 2889717 - 2890700 | 35152.0 |
| nmt1-like family protein | D560_3107 | C0SP84 | Positive | 2890791 - 2891831 | 35882.3 |
| abc transporter family protein | D560_3108 | Q57855 | Positive | 2891824 - 2892633 | 29661.0 |
| binding--dependent transport system inner membrane component family protein | D560_3109 | P40401 | Positive | 2892639 - 2893433 | 29082.1 |
| transaldolase | D560_3110 | Q2KVT3 | Negative | 2893497 - 2894453 | 34353.1 |
| hypothetical protein | D560_3111 | Not Available | Negative | 2894485 - 2894688 | 7625.01 |
| carbamoyl-phosphate synthase, small subunit | D560_3112 | Q8XZ85 | Positive | 2894677 - 2895831 | 41386.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




