Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | D560_0302 | Not Available | Negative | 273615 - 273998 | 13780.1 |
| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family protein | D560_0303 | P25534 | Positive | 274203 - 275309 | 39086.9 |
| helix-turn-helix family protein | D560_0304 | P37007 | Positive | 275407 - 276357 | 35712.9 |
| tim-barrel, nifr3 family protein | D560_0305 | Q9HUW1 | Positive | 276621 - 277526 | 32914.3 |
| bacterial regulatory, fis family protein | D560_0306 | P64130 | Positive | 277567 - 277806 | 9129.03 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | D560_0307 | B1JVV6 | Positive | 277872 - 279461 | 55949.6 |
| crossover junction endodeoxyribonuclease ruvc | D560_0308 | Q2KVY8 | Positive | 279461 - 280006 | 19182.4 |
| holliday junction dna helicase ruva | D560_0309 | Q2KVY6 | Positive | 280090 - 280662 | 19962.4 |
| putative lipoprotein | D560_0310 | Not Available | Negative | 280666 - 281346 | 25031.5 |
| putative membrane protein | D560_0311 | Not Available | Negative | 281520 - 281633 | 3744.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




