Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate enzyme, n-terminal tpp binding domain protein | D560_3083 | O53554 | Positive | 2867076 - 2868074 | 34238.2 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_3084 | O53554 | Positive | 2868079 - 2868633 | 19668.7 |
| maoc like domain protein | D560_3085 | P96670 | Positive | 2868789 - 2869163 | 13792.3 |
| class ii aldolase and adducin n-terminal domain protein | D560_3086 | Q9HYH5 | Negative | 2869177 - 2869953 | 28689.7 |
| tripartite tricarboxylate transporter receptor family protein | D560_3087 | P0A177 | Negative | 2869950 - 2870945 | 35239.4 |
| acyl-coa dehydrogenase, n-terminal domain protein | D560_3088 | Q2KHZ9 | Negative | 2871118 - 2872311 | 43135.0 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | D560_3089 | P0DP90 | Negative | 2872366 - 2874030 | 59826.8 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_3090 | P0A9F8 | Positive | 2874299 - 2875192 | 32454.0 |
| tyrosine recombinase xerd | D560_3091 | Q8XWD0 | Positive | 2875220 - 2876146 | 33720.4 |
| ybak / prolyl-trna synthetases associated domain protein | D560_3092 | P45202 | Positive | 2876160 - 2876648 | 17604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




