Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase, class ii, calvin cycle subtype | D560_3073 | Q56815 | Positive | 2857401 - 2858465 | 38369.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | D560_3074 | Q7WMI1 | Positive | 2858660 - 2859541 | 32332.9 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | D560_3075 | Q5E1R4 | Positive | 2859785 - 2860258 | 16158.7 |
| phosphoribosylaminoimidazole carboxylase, atpase subunit | D560_3076 | P52559 | Positive | 2860346 - 2861524 | 41602.7 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | D560_3077 | Q9UYB2 | Positive | 2861517 - 2862545 | 35810.9 |
| hypothetical protein | D560_3078 | Not Available | Negative | 2862599 - 2862868 | 9979.32 |
| fad binding domain protein | D560_3079 | P9WM50 | Negative | 2862958 - 2863746 | 29559.5 |
| tonb dependent receptor family protein | D560_3080 | A1JTG3 | Negative | 2863858 - 2864865 | 36552.1 |
| tonb-dependent receptor plug domain protein | D560_3081 | A1JTG3 | Negative | 2865030 - 2865863 | 28340.3 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_3082 | P40883 | Positive | 2865905 - 2866894 | 35481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




