Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | D560_3023 | Q2KWB3 | Positive | 2813848 - 2814486 | 22869.2 |
| uroporphyrinogen-iii c-methyltransferase | D560_3024 | Q2KWB0 | Negative | 2814489 - 2815340 | 29967.0 |
| putative exported protein | D560_3025 | Not Available | Positive | 2816366 - 2817079 | 25288.1 |
| hypothetical protein | D560_3026 | P64583 | Positive | 2817168 - 2817485 | 11523.7 |
| hypothetical protein | D560_3027 | Not Available | Positive | 2817555 - 2817950 | 14340.7 |
| hypothetical protein | D560_3028 | Not Available | Positive | 2817986 - 2818306 | 11668.3 |
| transposase family protein | D560_3029 | Q06126 | Negative | 2818356 - 2819576 | 47435.5 |
| ubid decarboxylase family protein | D560_3030 | Q7WML9 | Negative | 2819682 - 2821226 | 56896.8 |
| transglycosylase slt domain protein | D560_3031 | P27380 | Positive | 2821311 - 2822129 | 28306.2 |
| degt/dnrj/eryc1/strs aminotransferase family protein | D560_3032 | Q795M6 | Negative | 2822262 - 2823416 | 41471.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




