Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | D560_2973 | Not Available | Positive | 2776584 - 2777036 | 14808.5 |
| queuine synthase | D560_2974 | Q2KXN2 | Negative | 2777080 - 2777922 | 31524.5 |
| hypothetical protein | D560_2975 | Not Available | Negative | 2778124 - 2778249 | 4126.89 |
| isocitrate lyase | D560_2976 | Q9K9H0 | Positive | 2778241 - 2779557 | 48136.9 |
| transcriptional regulator ohrr | D560_2977 | O34777 | Positive | 2779782 - 2780192 | 14896.4 |
| peroxiredoxin, ohr subfamily protein | D560_2978 | P0A0V4 | Positive | 2780333 - 2780758 | 14804.8 |
| abc transporter family protein | D560_2979 | P36879 | Positive | 2780931 - 2781848 | 33679.0 |
| abc-2 type transporter family protein | D560_2980 | P0AFN8 | Positive | 2781845 - 2782360 | 18676.2 |
| abc-2 type transporter family protein | D560_2981 | P0AFN8 | Positive | 2782360 - 2782605 | 9249.65 |
| hypothetical protein | D560_2982 | P0AFS7 | Negative | 2782577 - 2783692 | 39496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




