Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory s, gntr family protein | D560_2943 | Q8FHD1 | Positive | 2749164 - 2749913 | 27843.6 |
| malonyl-coa decarboxylase family protein | D560_2944 | P12617 | Positive | 2749876 - 2751135 | 46907.4 |
| enoyl-coa hydratase/isomerase family protein | D560_2945 | Q52995 | Positive | 2751138 - 2751917 | 27683.4 |
| amp-binding enzyme family protein | D560_2946 | O07610 | Positive | 2751923 - 2753164 | 45289.5 |
| amp-binding enzyme family protein | D560_2947 | Q0S7V5 | Positive | 2753119 - 2753466 | 12620.3 |
| tripartite tricarboxylate transporter receptor family protein | D560_2948 | Q45389 | Positive | 2753639 - 2754607 | 33368.2 |
| superoxide dismutase | D560_2949 | P00446 | Positive | 2754761 - 2755249 | 16575.8 |
| aldo/keto reductase family protein | D560_2950 | P77735 | Negative | 2755284 - 2756240 | 34476.8 |
| abc transporter substrate binding family protein | D560_2951 | Q9ZDG2 | Positive | 2756496 - 2757434 | 32154.0 |
| branched-chain amino acid transport system / permease component family protein | D560_2952 | Q9ZDG1 | Positive | 2757526 - 2758053 | 18770.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




