Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase family protein | D560_2933 | Q8X4Q8 | Positive | 2736240 - 2737982 | 60432.2 |
| hypothetical protein | D560_2934 | Q2KXY5 | Positive | 2738399 - 2738878 | 17925.5 |
| transcription termination factor nusa | D560_2935 | Q83BS0 | Positive | 2738875 - 2740353 | 55030.3 |
| translation initiation factor if-2 | D560_2936 | Q2KXY7 | Positive | 2740430 - 2743555 | 109918.0 |
| ribosome-binding factor a | D560_2937 | Q2KXY9 | Positive | 2743583 - 2743981 | 14730.7 |
| gtp-binding protein typa/bipa | D560_2938 | P0A3B2 | Positive | 2744774 - 2746594 | 67579.0 |
| hypothetical protein | D560_2939 | Not Available | Negative | 2746596 - 2746733 | 5230.28 |
| putative gamma-glutamyltransferase | D560_2940 | Not Available | Negative | 2746696 - 2747004 | 10981.1 |
| gamma-glutamyltranspeptidase family protein | D560_2941 | Q05053 | Negative | 2746983 - 2748281 | 45723.3 |
| putative spermidine synthase | D560_2942 | Q7NQK7 | Positive | 2748317 - 2749087 | 28438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




