Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase family protein | D560_2923 | P0AEM2 | Positive | 2729252 - 2729707 | 16487.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D560_2924 | Q7VYS2 | Positive | 2729728 - 2730693 | 34681.7 |
| maleylacetoacetate isomerase | D560_2925 | Q9KSB2 | Positive | 2730747 - 2731391 | 23720.3 |
| Trna-thr | Not Available | Not Available | Positive | 2731566 - 2731641 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2731752 - 2731827 | Not Available |
| cupin region | D560_2928 | Not Available | Negative | 2731897 - 2732238 | 11741.3 |
| cobw/hypb/ureg, nucleotide-binding domain protein | D560_2929 | Q8VEH6 | Positive | 2732718 - 2733398 | 24167.1 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2930 | P76250 | Positive | 2733473 - 2734372 | 33081.2 |
| Trna-met | Not Available | Not Available | Positive | 2735052 - 2735128 | Not Available |
| segregation and condensation protein b | D560_2932 | Q83CP9 | Positive | 2735224 - 2736198 | 35274.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




