Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2903 | Not Available | Negative | 2712512 - 2713027 | 19148.9 |
| pepsy-associated tm helix family protein | D560_2904 | Not Available | Negative | 2713048 - 2713674 | 23515.5 |
| hypothetical protein | D560_2905 | Not Available | Positive | 2713848 - 2714393 | 19760.5 |
| crcb-like family protein | D560_2906 | Q2KXU0 | Positive | 2714413 - 2714793 | 13327.5 |
| pyridine nucleotide-disulfide oxidoreductase family protein | D560_2907 | Q6N3F3 | Negative | 2714802 - 2716121 | 46942.1 |
| squalene synthase hpnd | D560_2908 | P37294 | Negative | 2716118 - 2716981 | 32797.4 |
| squalene synthase hpnc | D560_2909 | Q6N3F1 | Negative | 2716983 - 2717804 | 30938.8 |
| alanine racemase | D560_2910 | Q2KXU7 | Positive | 2718012 - 2719040 | 36140.3 |
| short chain dehydrogenase family protein | D560_2911 | Q9X248 | Positive | 2719152 - 2719718 | 20291.5 |
| hypothetical protein | D560_2912 | Not Available | Negative | 2719792 - 2720394 | 21196.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




