Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | D560_2853 | Q9I163 | Positive | 2672119 - 2672367 | 9003.79 |
| integrase core domain protein | D560_2854 | P24577 | Positive | 2672724 - 2673287 | 21202.9 |
| integrase core domain protein | D560_2855 | P24577 | Positive | 2673317 - 2673547 | 8874.46 |
| pirin c-terminal cupin domain protein | D560_2856 | Q9I163 | Positive | 2673616 - 2674191 | 20494.6 |
| methyltransferase domain protein | D560_2857 | Not Available | Negative | 2674169 - 2675080 | 33784.7 |
| sensory box protein | D560_2858 | Q9I3S1 | Positive | 2675478 - 2676872 | 50754.0 |
| lysm domain protein | D560_2859 | P39800 | Positive | 2677032 - 2677346 | 10596.7 |
| peptidase m23 family protein | D560_2860 | P45682 | Positive | 2677349 - 2677705 | 12504.9 |
| copper resistance d family protein | D560_2861 | Not Available | Negative | 2677709 - 2678173 | 16438.9 |
| hypothetical protein | D560_2862 | Q2KWN1 | Positive | 2678310 - 2678792 | 17952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




