Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase family protein | D560_2833 | Not Available | Negative | 2658955 - 2659389 | 16337.8 |
| gntp permease family protein | D560_2834 | Q9ZIJ1 | Negative | 2659490 - 2660320 | 28828.1 |
| citrate transporter family protein | D560_2835 | Q9ZIJ1 | Negative | 2660335 - 2660859 | 17707.6 |
| lysr substrate binding domain protein | D560_2836 | P39592 | Negative | 2660892 - 2661266 | 13912.9 |
| lysr substrate binding domain protein | D560_2837 | P94387 | Negative | 2661318 - 2661575 | 9365.42 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2838 | O33945 | Negative | 2661614 - 2661784 | 6284.63 |
| lrga family protein | D560_2839 | P39590 | Positive | 2661963 - 2662856 | 31622.8 |
| hypothetical protein | D560_2840 | Not Available | Positive | 2662940 - 2663242 | 10859.2 |
| hypothetical protein | D560_2841 | Not Available | Positive | 2663278 - 2663394 | 3820.65 |
| short chain dehydrogenase family protein | D560_2842 | Q5HGK2 | Negative | 2663391 - 2664152 | 26409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




