Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter receptor family protein | D560_2763 | Q45389 | Positive | 2589700 - 2590689 | 34532.5 |
| tripartite tricarboxylate transporter receptor family protein | D560_2764 | P0A177 | Positive | 2590720 - 2591724 | 34695.8 |
| 3-isopropylmalate dehydrogenase | D560_2765 | Q3KF21 | Positive | 2591757 - 2592092 | 12105.7 |
| putative 3-isopropylmalate dehydrogenase | D560_2766 | Not Available | Positive | 2592089 - 2592352 | 9417.42 |
| amidohydrolase family protein | D560_2767 | O87170 | Positive | 2592532 - 2593155 | 22343.8 |
| putative cold shock protein a | D560_2768 | P0A353 | Positive | 2593604 - 2593813 | 7558.12 |
| dna/rna non-specific endonuclease family protein | D560_2769 | Q9Y2C4 | Positive | 2594029 - 2594955 | 33821.2 |
| bcct transporter family protein | D560_2770 | Q6F754 | Negative | 2594990 - 2596249 | 46939.1 |
| bcct transporter family protein | D560_2771 | Q6F754 | Negative | 2596246 - 2596950 | 25442.4 |
| hypothetical protein | D560_2772 | Not Available | Negative | 2597079 - 2597327 | 8832.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




