Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter family protein | D560_2743 | P69680 | Negative | 2573261 - 2574499 | 43082.0 |
| nitrogen regulatory p-ii family protein | D560_2744 | P0AC57 | Negative | 2574547 - 2574885 | 12068.8 |
| helix-turn-helix family protein | D560_2745 | P37007 | Negative | 2575132 - 2576082 | 35659.8 |
| transposase family protein | D560_2746 | Q06126 | Positive | 2576649 - 2577869 | 47435.5 |
| transposase family protein | D560_2747 | Q06126 | Positive | 2577963 - 2579183 | 47463.6 |
| membrane fusogenic activity family protein | D560_2748 | Q8ZLY9 | Positive | 2579243 - 2579506 | 9981.87 |
| aaa domain family protein | D560_2749 | P57015 | Positive | 2579750 - 2581126 | 47789.1 |
| ribosomal protein l35 | D560_2750 | Q2KZL7 | Positive | 2581547 - 2581744 | 7271.15 |
| ribosomal protein l20 | D560_2751 | Q2KZL8 | Positive | 2581760 - 2582119 | 13243.4 |
| phenylalanine--trna ligase, alpha subunit | D560_2752 | Q7WKR5 | Positive | 2582192 - 2583214 | 38354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




