Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_2723 | Not Available | Negative | 2549154 - 2549537 | 13957.7 |
| 'cold-shock' dna-binding domain protein | D560_2724 | P72366 | Negative | 2549736 - 2549981 | 8659.15 |
| atp-dependent clp protease adaptor clps family protein | D560_2725 | Q2KZI1 | Positive | 2550317 - 2550520 | 7681.49 |
| hypothetical protein | D560_2726 | Not Available | Negative | 2550612 - 2550776 | 5315.33 |
| putative peptidase inhibitor domain protein | D560_2727 | Q87E11 | Positive | 2551164 - 2551814 | 24502.0 |
| alpha-2-macroglobulin family protein | D560_2728 | Q87E11 | Positive | 2551811 - 2555725 | 144175.0 |
| transglycosylase family protein | D560_2729 | P76577 | Positive | 2555779 - 2556072 | 10572.7 |
| penicillin-binding protein 1c | D560_2730 | P76577 | Positive | 2556069 - 2557475 | 50368.1 |
| atpase associated with various cellular activities family protein | D560_2731 | P0ABI1 | Positive | 2557960 - 2559021 | 38484.1 |
| hypothetical protein | D560_2732 | Not Available | Negative | 2559098 - 2559400 | 10576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




