Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | D560_2713 | Q2KZE4 | Negative | 2539005 - 2539661 | 23541.0 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | D560_2714 | Q2KZE5 | Negative | 2539815 - 2540579 | 27249.7 |
| tetraacyldisaccharide 4'-kinase | D560_2715 | Q2KZE8 | Negative | 2540799 - 2541665 | 30628.7 |
| biopolymer transport exbd/tolr family protein | D560_2716 | Q9ZHV9 | Negative | 2541830 - 2542243 | 14737.7 |
| mota/tolq/exbb proton channel family protein | D560_2717 | O27101 | Negative | 2542240 - 2542836 | 21899.8 |
| exodeoxyribonuclease vii, large subunit | D560_2718 | Q2KZF3 | Positive | 2543177 - 2544535 | 48941.0 |
| superoxide dismutase | D560_2719 | P37369 | Positive | 2544629 - 2545207 | 21415.9 |
| integrase core domain protein | D560_2720 | P24577 | Negative | 2545332 - 2546153 | 31158.7 |
| voltage gated chloride channel family protein | D560_2721 | Q57T52 | Positive | 2546606 - 2547781 | 40405.0 |
| 3-oxoadipyl-coa thiolase | D560_2722 | Q8VPF1 | Positive | 2547885 - 2549090 | 41814.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




