Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase fkbm domain protein | D560_2683 | Not Available | Positive | 2511800 - 2512987 | 44624.2 |
| acyltransferase family protein | D560_2684 | Not Available | Positive | 2513239 - 2514072 | 31039.9 |
| hypothetical protein | D560_2685 | Not Available | Negative | 2514024 - 2514185 | 5744.99 |
| integrase core domain protein | D560_2686 | P24577 | Positive | 2514395 - 2515216 | 31158.7 |
| argininosuccinate synthase | D560_2687 | A9IQ90 | Negative | 2515320 - 2516657 | 49684.2 |
| ornithine carbamoyltransferase | D560_2688 | Q2KZD0 | Negative | 2516766 - 2517707 | 35219.2 |
| transaminase, acetylornithine/succinylornithine family protein | D560_2689 | Q7WKW5 | Negative | 2517763 - 2518944 | 41992.9 |
| hypothetical protein | D560_2690 | Not Available | Positive | 2519103 - 2519393 | 10784.0 |
| nad binding domain of 6-phosphogluconate dehydrogenase family protein | D560_2691 | A5CAL1 | Negative | 2519440 - 2520108 | 24013.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein | D560_2692 | Not Available | Negative | 2520105 - 2520392 | 10016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




