Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | D560_2633 | Q06126 | Positive | 2468319 - 2469539 | 47439.5 |
| n-formylglutamate amidohydrolase | D560_2634 | Q9HU92 | Negative | 2469639 - 2470505 | 32265.2 |
| tripartite tricarboxylate transporter receptor family protein | D560_2635 | P27103 | Negative | 2470566 - 2471546 | 33846.7 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_2636 | P0A9F8 | Positive | 2471738 - 2472613 | 32438.0 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | D560_2637 | Q2KZ71 | Positive | 2472622 - 2473734 | 41169.5 |
| sulfite exporter taue/safe family protein | D560_2638 | P44070 | Positive | 2473816 - 2474637 | 28327.8 |
| glutathione s-transferase, c-terminal domain protein | D560_2639 | P0ACA2 | Negative | 2474713 - 2475321 | 22428.9 |
| adenylosuccinate lyase | D560_2640 | P44797 | Positive | 2475459 - 2476835 | 50355.3 |
| cytochrome c' | D560_2641 | P00138 | Positive | 2476897 - 2477340 | 15422.5 |
| prokaryotic cytochrome b561 family protein | D560_2642 | Not Available | Negative | 2477407 - 2478195 | 28395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




