Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium bile acid symporter family protein | D560_2603 | P39879 | Negative | 2438683 - 2439540 | 30720.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | D560_2604 | B2IDU5 | Negative | 2439628 - 2440605 | 34140.3 |
| aaa domain protein | D560_2605 | O07635 | Negative | 2440730 - 2442385 | 60439.8 |
| ahpc/tsa family protein | D560_2606 | Q83CY8 | Negative | 2442434 - 2442898 | 16882.2 |
| hypothetical protein | D560_2607 | O08776 | Negative | 2442895 - 2443356 | 16175.5 |
| aminotransferase class i and ii family protein | D560_2608 | P77434 | Positive | 2443582 - 2444769 | 44368.6 |
| homoserine dehydrogenase | D560_2609 | P29365 | Positive | 2444790 - 2446070 | 45565.0 |
| threonine synthase | D560_2610 | P37145 | Positive | 2446067 - 2447476 | 50939.7 |
| hypothetical protein | D560_2611 | Not Available | Negative | 2447583 - 2447759 | 6535.14 |
| integrase core domain protein | D560_2612 | P24577 | Positive | 2447969 - 2448790 | 31139.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




