Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate dehydratase, fe/s-dependent | D560_0252 | Q937N8 | Positive | 230294 - 232909 | 95209.2 |
| putative acnd-accessory protein prpf | D560_0253 | Q8EJW4 | Positive | 233005 - 234150 | 39888.5 |
| lyse type translocator family protein | D560_0254 | Q9L6N6 | Positive | 234211 - 234819 | 21831.4 |
| tripartite tricarboxylate transporter receptor family protein | D560_0255 | Q45389 | Negative | 234942 - 235874 | 32631.0 |
| short chain dehydrogenase family protein | D560_0256 | Q9WYG0 | Negative | 236030 - 236560 | 18465.4 |
| hypothetical protein | D560_0257 | Not Available | Positive | 236605 - 236820 | 7649.88 |
| short chain dehydrogenase family protein | D560_0258 | Q9KJF1 | Negative | 236778 - 237485 | 24845.2 |
| phosphoenolpyruvate phosphomutase family protein | D560_0259 | P11435 | Negative | 237495 - 238388 | 32134.2 |
| bacterial regulatory s, gntr family protein | D560_0260 | O05494 | Negative | 238372 - 239070 | 26210.4 |
| aconitate hydratase 1 | D560_0261 | Q5SMF6 | Positive | 239469 - 242096 | 94649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




