Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | D560_2583 | Q06126 | Positive | 2422909 - 2424129 | 47567.6 |
| putative hd phosphohydrolase | D560_2584 | D0E8I5 | Negative | 2424148 - 2424573 | 15566.7 |
| ring hydroxylating alpha subunit family protein | D560_2585 | Not Available | Negative | 2424911 - 2425081 | 6545.65 |
| rieske domain protein | D560_2586 | P0ABR8 | Negative | 2425102 - 2425821 | 27561.3 |
| acyltransferase family protein | D560_2587 | P37669 | Negative | 2426199 - 2427203 | 37601.5 |
| tripartite tricarboxylate transporter receptor family protein | D560_2588 | P0A177 | Negative | 2427360 - 2428331 | 34289.5 |
| bacterial transcriptional regulator family protein | D560_2589 | Q6XL52 | Positive | 2428410 - 2429198 | 27315.9 |
| exodeoxyribonuclease vii, small subunit | D560_2590 | Q7WL39 | Positive | 2429270 - 2429506 | 8583.18 |
| polyprenyl synthetase family protein | D560_2591 | Q45220 | Positive | 2429515 - 2430426 | 31675.2 |
| transketolase, thiamine diphosphate binding domain protein | D560_2592 | Q2KZ15 | Positive | 2430470 - 2431582 | 40217.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




