Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylpurine-dna glycosylase family protein | D560_2553 | Q3K692 | Positive | 2390163 - 2390615 | 16518.9 |
| putative 3-methyladenine dna glycosylase | D560_2554 | Q48DL2 | Positive | 2390591 - 2390869 | 10143.1 |
| phop regulatory network yrbl family protein | D560_2555 | Not Available | Negative | 2390870 - 2391568 | 26362.1 |
| rmuc family protein | D560_2556 | Q87AZ9 | Positive | 2391807 - 2393027 | 44687.6 |
| acyl-coa dehydrogenase domain protein | D560_2557 | P33224 | Positive | 2393059 - 2393343 | 10498.4 |
| acyl-coa dehydrogenase, c-terminal domain protein | D560_2558 | P33224 | Positive | 2393371 - 2394687 | 47219.6 |
| ribose 5-phosphate isomerase a | D560_2559 | Q2KYQ1 | Positive | 2394734 - 2395408 | 23485.5 |
| phosphate transport system regulatory protein phou | D560_2560 | Q9Z410 | Positive | 2395560 - 2396309 | 28058.8 |
| bacterial fe(2+) trafficking family protein | D560_2561 | Q2KYQ6 | Negative | 2396575 - 2396847 | 10578.6 |
| amino-acid n-acetyltransferase | D560_2562 | Q8XZZ5 | Negative | 2396947 - 2398302 | 49059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




