Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation operon negative regulatory protein paax | D560_2523 | P76086 | Negative | 2364978 - 2365925 | 34708.7 |
| phenylacetic acid catabolic family protein | D560_2524 | P76077 | Positive | 2366112 - 2367101 | 37495.6 |
| phenylacetic acid degradation b family protein | D560_2525 | P76078 | Positive | 2367171 - 2367455 | 10764.8 |
| phenylacetic acid degradation protein paac | D560_2526 | P76079 | Positive | 2367462 - 2368226 | 29079.5 |
| phenylacetate-coa oxygenase, paaj subunit | D560_2527 | P76080 | Positive | 2368223 - 2368663 | 15724.8 |
| 2fe-2s iron-sulfur cluster binding domain protein | D560_2528 | P76081 | Positive | 2368731 - 2369819 | 40270.7 |
| phenylacetic acid degradation protein paan | D560_2529 | S0ENH1 | Positive | 2369872 - 2371536 | 59312.8 |
| phenylacetate degradation putative enoyl-coa hydratase paab | D560_2530 | P77467 | Positive | 2371547 - 2372335 | 28028.6 |
| phenylacetic acid degradation protein paad | D560_2531 | P76084 | Positive | 2372335 - 2372802 | 16270.2 |
| transposase family protein | D560_2532 | Q06126 | Negative | 2372823 - 2374043 | 47435.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




