Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane domain protein | D560_2513 | Not Available | Negative | 2357044 - 2357430 | 13975.5 |
| hypothetical protein | D560_2514 | Not Available | Positive | 2357567 - 2357689 | 4551.58 |
| ribosomal protein l19 | D560_2515 | Q2L2Q1 | Positive | 2357703 - 2358083 | 14115.2 |
| transposase family protein | D560_2516 | Q06126 | Positive | 2358275 - 2359495 | 47435.5 |
| nudix domain protein | D560_2517 | A4WBH1 | Positive | 2359620 - 2360354 | 27108.7 |
| xylose isomerase-like tim barrel family protein | D560_2518 | Q0KBD1 | Negative | 2360343 - 2361140 | 29125.7 |
| ribosome small subunit-dependent gtpase a | D560_2519 | P67679 | Negative | 2361324 - 2362223 | 32768.3 |
| peptidase m48 family protein | D560_2520 | Q8RX88 | Negative | 2362220 - 2363473 | 46611.3 |
| exonuclease family protein | D560_2521 | Q2L2P5 | Positive | 2363534 - 2364079 | 20752.8 |
| yjef-related family protein | D560_2522 | Q7WGX4 | Positive | 2364382 - 2365008 | 21751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




