Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | D560_2483 | Q46Y48 | Positive | 2327768 - 2328850 | 38568.4 |
| prephenate dehydrogenase family protein | D560_2484 | P20692 | Positive | 2328847 - 2329743 | 30810.8 |
| epsp synthase family protein | D560_2485 | Q2L2S7 | Positive | 2329743 - 2330705 | 33455.4 |
| epsp synthase family protein | D560_2486 | Q2L2S7 | Positive | 2330720 - 2331061 | 12408.9 |
| cytidylate kinase | D560_2487 | Q9RND6 | Positive | 2331103 - 2331756 | 23532.2 |
| ribosomal protein s1 | D560_2488 | Q9JZ44 | Positive | 2331957 - 2333669 | 62235.3 |
| integration host factor, beta subunit | D560_2489 | Q7W605 | Positive | 2333673 - 2334032 | 12918.3 |
| hypothetical protein | D560_2490 | Not Available | Positive | 2334198 - 2334512 | 11681.8 |
| tpr repeat family protein | D560_2491 | P0AB60 | Positive | 2334546 - 2335775 | 46477.2 |
| pfkb carbohydrate kinase family protein | D560_2492 | Q7WGU8 | Positive | 2335772 - 2336173 | 14097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




